BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC003971

Symbol
LOC658494

Product
Band 7 protein CG42540-like Protein

iBeetle-Base
TC003971

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	13 ± 2.2	5.2	18 ± 2.6	2.8
Brain	34 ± 4.9	13	16 ± 1.0	2.4
Anterior Midgut	10 ± 1.6	4.0	16 ± 8.1	2.4
Posterior Midgut	5.8 ± 1.5	2.2	5.6 ± 0.5	0.8
Hindgut	4.3 ± 1.5	1.6	2.0 ± 0.4	0.3
Tubule	0.3 ± 0.1	0.1	0.1 ± 0.1	0.0
Perirectal Tubules	1.3 ± 0.9	0.5
Rectal complex	5.7 ± 0.4	2.2	2.1 ± 0.3	0.3
Rectum	4.2 ± 0.3	1.6
Fat Body	1.4 ± 0.4	0.6	0.2 ± 0.3	0.0
Male Gonads	3.9 ± 0.5	1.5
Female Gonads	0.1 ± 0.1	0.1
Carcass	15 ± 5.1	5.7	24 ± 8.0	3.6

Whole Body	2.6 ± 0.3		6.6 ± 2.1

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003971-RA
TC003971-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003971	0.0 ± 0.0	0.2 ± 0.1	0.4 ± 0.0	3.7 ± 1.0

TC003971-RA	0.0 ± 0.0	0.1 ± 0.0	0.0 ± 0.1	2.2 ± 0.5
TC003971-RB	0.0 ± 0.0	0.1 ± 0.1	0.4 ± 0.1	1.5 ± 0.5