BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC004127
Symbol
 LOC655978
Product
 Ephrin-B1-like Protein
NCBI Equivalent
655978
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head2.6 ± 0.11.36.1 ± 1.31.8
Brain4.8 ± 0.12.47.2 ± 1.12.1
Anterior Midgut0.4 ± 0.1n.a.1.2 ± 0.10.3
Posterior Midgut0.6 ± 0.2n.a.1.5 ± 0.10.4
Hindgut4.9 ± 1.52.46.4 ± 0.81.9
Tubules (Free)0.3 ± 0.1n.a.0.2 ± 0.00.1
Perirectal Tubules11 ± 1.15.6  
Rectum4.2 ± 0.62.1  
Rectal complex3.0 ± 0.41.55.3 ± 0.91.6
Fat Body1.7 ± 0.3n.a.0.8 ± 0.70.2
Male Gonads1.2 ± 0.1n.a.  
Female Gonads1.4 ± 0.3n.a.  
Carcass5.1 ± 0.62.59.2 ± 1.12.7
Whole Body1.1 ± 0.33.4 ± 0.2
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC004127-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0041270.4 ± 0.11.7 ± 0.12.9 ± 0.74.2 ± 0.7
TC004127-RA0.4 ± 0.11.7 ± 0.12.9 ± 0.74.2 ± 0.7
0–1 h1–24 h24–36 h36–72 h0246810FPKM