BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004145

Symbol
LOC656720

Product
Probable E3 ubiquitin-protein ligase makorin-1-like Protein

NCBI Equivalent
656720

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	23 ± 0.5	2.1	12 ± 2.0	0.9
Brain	399 ± 49	37	195 ± 18	15
Anterior Midgut	36 ± 8.6	3.4	47 ± 1.9	3.6
Posterior Midgut	37 ± 12	3.4	44 ± 10	3.3
Hindgut	61 ± 34	5.7	52 ± 24	4.0
Tubules (Free)	22 ± 2.3	2.1	21 ± 1.3	1.6
Perirectal Tubules	23 ± 1.1	2.1
Rectum	27 ± 0.9	2.5
Rectal complex	12 ± 1.6	1.1	12 ± 0.5	0.9
Fat Body	25 ± 6.0	2.4	23 ± 5.8	1.8
Male Gonads	14 ± 2.3	1.3
Female Gonads	92 ± 29	8.6
Carcass	38 ± 3.4	3.6	40 ± 11	3.1

Whole Body	11 ± 0.9		13 ± 4.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004145-RA
TC004145-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004145	10 ± 1.2	5.2 ± 0.9	5.8 ± 0.9	6.5 ± 2.6

TC004145-RA	10 ± 1.0	5.2 ± 1.0	5.3 ± 1.0	6.3 ± 2.5
TC004145-RB	0.3 ± 0.2	0.0 ± 0.1	0.5 ± 0.1	0.1 ± 0.1