BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004292

Symbol
Taf9

Product
Transcription initiation factor TFIID subunit 9-like Protein

NCBI Equivalent
658474

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	15 ± 1.0	1.3	48 ± 6.9	1.7
Brain	28 ± 2.9	2.5	41 ± 5.2	1.4
Anterior Midgut	76 ± 1.9	6.7	70 ± 13	2.5
Posterior Midgut	87 ± 2.3	7.7	64 ± 6.2	2.2
Hindgut	34 ± 2.0	3.0	34 ± 7.3	1.2
Tubules (Free)	10 ± 1.7	0.9	11 ± 1.1	0.4
Perirectal Tubules	34 ± 2.6	3.0
Rectum	36 ± 2.5	3.2
Rectal complex	28 ± 1.2	2.5	25 ± 0.9	0.9
Fat Body	17 ± 5.2	1.5	39 ± 2.2	1.4
Male Gonads	12 ± 0.7	1.0
Female Gonads	63 ± 2.8	5.6
Carcass	37 ± 4.6	3.3	54 ± 8.5	1.9

Whole Body	11 ± 0.7		29 ± 8.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004292-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004292	120 ± 4.9	201 ± 19	334 ± 75	263 ± 23

TC004292-RA	120 ± 4.9	201 ± 19	334 ± 75	263 ± 23