BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004404

Symbol
LOC658763

Product
Lipase maturation factor 2-like Protein

NCBI Equivalent
658763

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	52 ± 4.0	1.2	38 ± 4.3	1.0
Brain	163 ± 1.4	3.9	125 ± 3.9	3.5
Anterior Midgut	15 ± 0.5	0.4	25 ± 2.2	0.7
Posterior Midgut	18 ± 2.9	0.4	26 ± 3.9	0.7
Hindgut	61 ± 25	1.4	70 ± 24	1.9
Tubules (Free)	19 ± 1.8	0.4	25 ± 2.8	0.7
Perirectal Tubules	34 ± 7.0	0.8
Rectum	37 ± 1.4	0.9
Rectal complex	36 ± 1.0	0.9	46 ± 1.9	1.3
Fat Body	44 ± 6.7	1.0	120 ± 104	3.3
Male Gonads	86 ± 23	2.0
Female Gonads	114 ± 25	2.7
Carcass	46 ± 1.8	1.1	54 ± 18	1.5

Whole Body	42 ± 5.4		36 ± 9.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004404-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004404	8.2 ± 1.0	5.1 ± 0.6	6.5 ± 0.7	7.5 ± 1.0

TC004404-RA	8.2 ± 1.0	5.1 ± 0.6	6.5 ± 0.7	7.5 ± 1.0