BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC004420
Symbol
 LOC660218
Product
 ATP-binding cassette sub-family F member 1-like Protein
NCBI Equivalent
660218
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head9.2 ± 0.50.422 ± 5.71.7
Brain3.8 ± 0.20.27.0 ± 0.30.5
Anterior Midgut12 ± 0.10.69.2 ± 0.50.7
Posterior Midgut11 ± 0.70.59.9 ± 0.30.7
Hindgut10 ± 3.20.59.0 ± 0.20.7
Tubules (Free)15 ± 1.20.713 ± 0.41.0
Perirectal Tubules13 ± 0.80.6  
Rectum12 ± 0.50.6  
Rectal complex16 ± 0.60.815 ± 0.41.1
Fat Body11 ± 2.30.59.8 ± 3.60.7
Male Gonads17 ± 3.20.8  
Female Gonads9.0 ± 0.10.4  
Carcass8.3 ± 1.30.49.8 ± 1.70.7
Whole Body21 ± 2.513 ± 0.6
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC004420-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00442031 ± 4.635 ± 2.922 ± 1.413 ± 1.7
TC004420-RA31 ± 4.635 ± 2.922 ± 1.413 ± 1.7
0–1 h1–24 h24–36 h36–72 h0510152025303540FPKM