BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004425

Symbol
Hsc70-3

Product
Heat shock 70 kDa protein cognate 3-like Protein

NCBI Equivalent
659147

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	82 ± 2.4	0.5	182 ± 53	1.8
Brain	91 ± 1.9	0.6	93 ± 8.0	0.9
Anterior Midgut	1049 ± 108	6.5	218 ± 38	2.2
Posterior Midgut	756 ± 28	4.7	181 ± 22	1.8
Hindgut	40 ± 3.0	0.2	43 ± 20	0.4
Tubules (Free)	97 ± 29	0.6	139 ± 19	1.4
Perirectal Tubules	70 ± 11	0.4
Rectum	59 ± 20	0.4
Rectal complex	50 ± 3.2	0.3	89 ± 31	0.9
Fat Body	229 ± 71	1.4	240 ± 50	2.4
Male Gonads	588 ± 132	3.6
Female Gonads	226 ± 36	1.4
Carcass	305 ± 218	1.9	96 ± 29	1.0

Whole Body	162 ± 21		100 ± 24

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004425-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004425	17 ± 1.7	11 ± 0.4	15 ± 0.7	25 ± 9.6

TC004425-RA	17 ± 1.7	11 ± 0.4	15 ± 0.7	25 ± 9.6