BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004469

Symbol
LOC103315038

NCBI Equivalent
103315038

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.3 ± 0.3	1.2	6.3 ± 0.5	1.1
Brain	4.4 ± 0.6	1.0	5.0 ± 0.4	0.9
Anterior Midgut	4.8 ± 0.5	1.0	5.5 ± 0.4	1.0
Posterior Midgut	4.5 ± 0.5	1.0	5.9 ± 0.7	1.1
Hindgut	3.3 ± 0.6	0.7	3.9 ± 0.4	0.7
Tubules (Free)	5.8 ± 0.6	1.3	7.2 ± 0.4	1.3
Perirectal Tubules	4.0 ± 0.7	0.9
Rectum	5.8 ± 0.1	1.3
Rectal complex	4.6 ± 0.3	1.0	5.2 ± 0.6	0.9
Fat Body	3.2 ± 0.8	0.7	2.0 ± 0.3	0.4
Male Gonads	2.6 ± 0.3	0.6
Female Gonads	5.3 ± 0.8	1.2
Carcass	2.3 ± 0.2	0.5	2.5 ± 0.3	0.5

Whole Body	4.6 ± 0.3		5.6 ± 1.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004469-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004469	4.4 ± 0.3	6.8 ± 0.9	8.4 ± 0.6	4.4 ± 0.5

TC004469-RA	4.4 ± 0.3	6.8 ± 0.9	8.4 ± 0.6	4.4 ± 0.5