BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY show

Gene ID
TC004521

Symbol
LOC100141680

Product
DNA ligase 3-like Protein

iBeetle-Base
TC004521

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	1.4 ± 0.3	n.a.	2.1 ± 0.6	1.0
Brain	2.1 ± 0.4	1.0	3.4 ± 0.4	1.7
Anterior Midgut	2.0 ± 0.4	1.0	2.6 ± 0.4	1.3
Posterior Midgut	2.0 ± 0.4	1.0	3.5 ± 0.9	1.8
Hindgut	1.5 ± 0.3	n.a.	2.4 ± 0.5	1.2
Tubule	1.0 ± 0.2	n.a.	1.1 ± 0.1	n.a.
Perirectal Tubules	2.5 ± 0.1	1.2
Rectal complex	1.8 ± 0.1	n.a.	2.2 ± 0.2	1.1
Rectum	2.2 ± 0.1	1.1
Fat Body	2.8 ± 0.3	1.4	5.1 ± 0.7	2.5
Male Gonads	2.9 ± 0.1	1.4
Female Gonads	6.3 ± 1.1	3.1
Carcass	2.7 ± 1.2	1.4	3.0 ± 0.7	1.5

Whole Body	1.8 ± 0.4		1.9 ± 0.5

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004521-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004521	6.2 ± 0.4	5.0 ± 0.5	6.7 ± 0.9	4.1 ± 0.7

TC004521-RA	6.2 ± 0.4	5.0 ± 0.5	6.7 ± 0.9	4.1 ± 0.7