BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC004521
Symbol
 LOC100141680
Product
 DNA ligase 3-like Protein
NCBI Equivalent
100141680
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head1.4 ± 0.3n.a.2.1 ± 0.61.0
Brain2.1 ± 0.41.03.4 ± 0.41.7
Anterior Midgut2.0 ± 0.41.02.6 ± 0.41.3
Posterior Midgut2.0 ± 0.41.03.5 ± 0.91.8
Hindgut1.5 ± 0.3n.a.2.4 ± 0.51.2
Tubules (Free)1.0 ± 0.2n.a.1.1 ± 0.1n.a.
Perirectal Tubules2.5 ± 0.11.2  
Rectum2.2 ± 0.11.1  
Rectal complex1.8 ± 0.1n.a.2.2 ± 0.21.1
Fat Body2.8 ± 0.31.45.1 ± 0.72.5
Male Gonads2.9 ± 0.11.4  
Female Gonads6.3 ± 1.13.1  
Carcass2.7 ± 1.21.43.0 ± 0.71.5
Whole Body1.8 ± 0.41.9 ± 0.5
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC004521-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0045216.2 ± 0.45.0 ± 0.56.7 ± 0.94.1 ± 0.7
TC004521-RA6.2 ± 0.45.0 ± 0.56.7 ± 0.94.1 ± 0.7
0–1 h1–24 h24–36 h36–72 h0246810FPKM