BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004559

Symbol
LOC656823

Product
Uridine phosphorylase 1-like Protein

NCBI Equivalent
656823

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	35 ± 1.9	5.7	8.2 ± 2.0	0.8
Brain	703 ± 40	114	373 ± 42	38
Anterior Midgut	1.9 ± 0.4	0.3	4.2 ± 1.0	0.4
Posterior Midgut	1.7 ± 0.0	0.3	4.0 ± 0.7	0.4
Hindgut	32 ± 54	5.2	0.1 ± 0.2	0.0
Tubules (Free)	0.0 ± 0.0	0.0	0.2 ± 0.1	0.0
Perirectal Tubules	1.0 ± 0.5	0.2
Rectum	0.6 ± 0.2	0.1
Rectal complex	0.4 ± 0.1	0.1	1.3 ± 0.5	0.1
Fat Body	13 ± 9.6	2.1	57 ± 30	5.8
Male Gonads	1.0 ± 0.3	0.2
Female Gonads	9.9 ± 1.3	1.6
Carcass	11 ± 8.0	1.7	14 ± 8.6	1.4

Whole Body	6.2 ± 1.7		9.7 ± 1.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004559-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004559	13 ± 2.0	4.5 ± 0.8	0.4 ± 0.1	9.1 ± 1.3

TC004559-RA	13 ± 2.0	4.5 ± 0.8	0.4 ± 0.1	9.1 ± 1.3