BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC004609
Symbol
 alpha-Cat
Product
 Catenin alpha-like Protein
NCBI Equivalent
658703
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head17 ± 0.82.116 ± 1.71.1
Brain48 ± 6.35.933 ± 0.82.2
Anterior Midgut3.4 ± 0.60.45.3 ± 0.60.4
Posterior Midgut3.2 ± 0.60.45.2 ± 0.60.3
Hindgut18 ± 4.32.218 ± 3.21.2
Tubules (Free)12 ± 3.31.411 ± 0.40.7
Perirectal Tubules24 ± 1.33.0  
Rectum27 ± 1.53.3  
Rectal complex18 ± 2.12.219 ± 0.71.3
Fat Body8.7 ± 1.31.15.7 ± 1.60.4
Male Gonads8.0 ± 0.51.0  
Female Gonads25 ± 0.93.1  
Carcass13 ± 2.51.714 ± 2.40.9
Whole Body8.1 ± 0.415 ± 5.2
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC004609-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0046093.3 ± 0.24.3 ± 0.65.2 ± 0.25.5 ± 2.5
TC004609-RA3.3 ± 0.24.3 ± 0.65.2 ± 0.25.5 ± 2.5
0–1 h1–24 h24–36 h36–72 h0246810FPKM