BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004611

Symbol
cv-c

Product
Rho GTPase-activating protein 7-like Protein

NCBI Equivalent
658403

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	18 ± 0.3	2.9	11 ± 6.0	0.7
Brain	12 ± 1.6	2.0	10 ± 1.2	0.6
Anterior Midgut	5.8 ± 1.0	0.9	6.5 ± 1.4	0.4
Posterior Midgut	5.8 ± 1.3	0.9	6.6 ± 1.1	0.4
Hindgut	45 ± 21	7.2	61 ± 6.2	3.7
Tubules (Free)	24 ± 2.0	3.8	28 ± 1.1	1.7
Perirectal Tubules	23 ± 17	3.7
Rectum	105 ± 2.0	17
Rectal complex	34 ± 7.8	5.5	29 ± 3.5	1.8
Fat Body	4.6 ± 0.3	0.7	3.6 ± 0.8	0.2
Male Gonads	1.6 ± 0.3	0.3
Female Gonads	0.6 ± 0.3	0.1
Carcass	11 ± 2.3	1.7	12 ± 0.8	0.8

Whole Body	6.2 ± 0.6		16 ± 3.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004611-RA
TC004611-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004611	0.2 ± 0.0	1.1 ± 0.2	1.3 ± 0.2	1.3 ± 0.3

TC004611-RA	0.2 ± 0.1	1.0 ± 0.2	1.3 ± 0.2	1.2 ± 0.2
TC004611-RB	0.0 ± 0.1	0.1 ± 0.2	0.0 ± 0.0	0.1 ± 0.2