BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004667

Symbol
LOC100142591

Product
Protein phosphatase 1 regulatory subunit 37-like Protein

NCBI Equivalent
100142591

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.1 ± 0.4	1.5	4.2 ± 0.7	1.0
Brain	15 ± 0.8	4.5	7.5 ± 0.8	1.9
Anterior Midgut	5.0 ± 0.7	1.5	5.7 ± 0.6	1.4
Posterior Midgut	4.0 ± 0.6	1.2	5.5 ± 0.9	1.4
Hindgut	3.2 ± 0.6	0.9	4.5 ± 0.9	1.1
Tubules (Free)	6.3 ± 0.7	1.8	7.3 ± 0.3	1.8
Perirectal Tubules	3.7 ± 0.4	1.1
Rectum	6.2 ± 0.4	1.8
Rectal complex	4.0 ± 0.5	1.2	3.8 ± 0.1	0.9
Fat Body	2.4 ± 0.7	0.7	2.3 ± 0.6	0.6
Male Gonads	1.4 ± 0.2	0.4
Female Gonads	15 ± 3.5	4.4
Carcass	3.0 ± 0.8	0.9	3.1 ± 1.4	0.8

Whole Body	3.4 ± 0.8		4.1 ± 0.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004667-RA
TC004667-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004667	6.4 ± 0.3	2.3 ± 0.2	1.8 ± 0.1	2.0 ± 0.5

TC004667-RA	4.8 ± 0.4	1.7 ± 0.1	1.2 ± 0.3	1.6 ± 0.4
TC004667-RB	1.6 ± 0.2	0.6 ± 0.1	0.6 ± 0.2	0.5 ± 0.1