BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC004675
Symbol
 Rpn1
Product
 26S proteasome non-ATPase regulatory subunit 2-like Protein
NCBI Equivalent
655910
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head21 ± 0.81.458 ± 7.92.0
Brain40 ± 3.42.733 ± 3.81.1
Anterior Midgut88 ± 7.75.852 ± 8.61.8
Posterior Midgut86 ± 8.45.742 ± 7.51.4
Hindgut20 ± 4.51.330 ± 8.31.0
Tubules (Free)28 ± 1.61.932 ± 1.21.1
Perirectal Tubules23 ± 2.41.5  
Rectum20 ± 2.71.3  
Rectal complex19 ± 1.41.328 ± 3.20.9
Fat Body30 ± 122.031 ± 101.0
Male Gonads9.8 ± 0.80.7  
Female Gonads57 ± 143.7  
Carcass64 ± 424.241 ± 291.4
Whole Body15 ± 1.830 ± 6.2
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC004675-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00467517 ± 1.415 ± 1.817 ± 4.014 ± 3.5
TC004675-RA17 ± 1.415 ± 1.817 ± 4.014 ± 3.5
0–1 h1–24 h24–36 h36–72 h051015202530FPKM