BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004713

Symbol
LOC659434

Product
heartless

NCBI Equivalent
659434

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	22 ± 0.9	3.6	20 ± 0.5	1.6
Brain	6.6 ± 0.7	1.1	7.7 ± 1.1	0.6
Anterior Midgut	3.3 ± 1.3	0.6	2.9 ± 0.5	0.2
Posterior Midgut	3.4 ± 1.4	0.6	2.5 ± 0.8	0.2
Hindgut	7.3 ± 0.6	1.2	8.2 ± 2.3	0.6
Tubules (Free)	13 ± 0.9	2.2	5.6 ± 0.7	0.4
Perirectal Tubules	34 ± 8.0	5.7
Rectum	19 ± 0.6	3.3
Rectal complex	27 ± 4.1	4.5	24 ± 2.0	1.9
Fat Body	1.4 ± 0.4	0.2	2.0 ± 0.4	0.2
Male Gonads	2.9 ± 0.7	0.5
Female Gonads	0.8 ± 0.3	0.1
Carcass	7.1 ± 1.0	1.2	12 ± 2.3	1.0

Whole Body	5.9 ± 0.4		13 ± 0.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004713-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004713	0.8 ± 0.1	3.9 ± 0.3	8.1 ± 1.7	9.7 ± 2.7

TC004713-RA	0.8 ± 0.1	3.9 ± 0.3	8.1 ± 1.7	9.7 ± 2.7