BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004781

Symbol
Ubqn

Product
Ubiquilin-1-like Protein

NCBI Equivalent
659758

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	22 ± 0.7	1.2	23 ± 2.2	0.9
Brain	26 ± 2.5	1.5	27 ± 1.6	1.0
Anterior Midgut	97 ± 12	5.4	73 ± 5.3	2.8
Posterior Midgut	78 ± 5.7	4.4	59 ± 6.9	2.2
Hindgut	30 ± 8.4	1.7	39 ± 6.1	1.5
Tubules (Free)	42 ± 4.9	2.3	43 ± 3.1	1.7
Perirectal Tubules	52 ± 5.6	2.9
Rectum	35 ± 2.4	2.0
Rectal complex	32 ± 1.3	1.8	36 ± 2.0	1.4
Fat Body	22 ± 4.2	1.2	56 ± 12	2.1
Male Gonads	15 ± 2.7	0.8
Female Gonads	58 ± 8.0	3.3
Carcass	60 ± 28	3.4	30 ± 3.0	1.1

Whole Body	18 ± 1.5		26 ± 9.0

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004781-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004781	12 ± 2.4	11 ± 1.8	7.4 ± 1.5	7.3 ± 2.6

TC004781-RA	12 ± 2.4	11 ± 1.8	7.4 ± 1.5	7.3 ± 2.6