BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC004793

Symbol
Oatp30B

Product
Solute carrier organic anion transporter family member 5A1-like Protein

NCBI Equivalent
661450

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	8.7 ± 0.2	1.0	15 ± 5.0	1.7
Brain	2.6 ± 0.3	0.3	2.1 ± 0.2	0.2
Anterior Midgut	0.8 ± 0.1	0.1	1.1 ± 0.1	0.1
Posterior Midgut	0.8 ± 0.2	0.1	1.5 ± 0.1	0.2
Hindgut	1.4 ± 0.1	0.2	3.1 ± 0.8	0.3
Tubules (Free)	7.5 ± 0.7	0.9	12 ± 0.4	1.3
Perirectal Tubules	5.1 ± 1.6	0.6
Rectum	9.0 ± 0.4	1.0
Rectal complex	5.9 ± 0.8	0.7	11 ± 3.9	1.2
Fat Body	1.7 ± 0.1	0.2	3.9 ± 0.4	0.4
Male Gonads	4.2 ± 0.8	0.5
Female Gonads	2.3 ± 0.8	0.3
Carcass	2.3 ± 0.6	0.3	4.0 ± 1.3	0.5

Whole Body	8.8 ± 0.8		8.9 ± 2.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004793-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004793	2.3 ± 0.2	1.9 ± 0.3	1.4 ± 0.1	1.8 ± 0.5

TC004793-RA	2.3 ± 0.2	1.9 ± 0.3	1.4 ± 0.1	1.8 ± 0.5