BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC004855

Symbol
Letm1

Product
LETM1 and EF-hand domain-containing protein anon-60Da, mitochondrial-like Protein

iBeetle-Base
TC004855

FlyAtlas 2
No fly homologues

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	13 ± 0.9	0.2	12 ± 0.6	0.9
Brain	23 ± 2.4	0.4	17 ± 1.2	1.2
Anterior Midgut	38 ± 6.3	0.7	23 ± 3.8	1.6
Posterior Midgut	32 ± 6.1	0.6	20 ± 2.9	1.4
Hindgut	27 ± 8.8	0.5	23 ± 5.6	1.6
Tubule	23 ± 2.2	0.5	25 ± 4.2	1.7
Perirectal Tubules	66 ± 12	1.3
Rectal complex	39 ± 3.7	0.8	31 ± 3.7	2.2
Rectum	24 ± 2.8	0.5
Fat Body	71 ± 23	1.4	15 ± 5.5	1.1
Male Gonads	197 ± 26	3.8
Female Gonads	17 ± 2.4	0.3
Carcass	20 ± 3.3	0.4	12 ± 0.5	0.9

Whole Body	52 ± 7.5		14 ± 3.3

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC004855-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC004855	13 ± 1.0	5.9 ± 0.3	5.5 ± 0.6	4.9 ± 0.6

TC004855-RA	13 ± 1.0	5.9 ± 0.3	5.5 ± 0.6	4.9 ± 0.6