BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC005006

Symbol
Roe1

Product
GrpE protein homolog, mitochondrial-like Protein

iBeetle-Base
TC005006

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	17 ± 1.4	0.7	21 ± 4.7	1.0
Brain	25 ± 3.0	1.1	24 ± 2.1	1.1
Anterior Midgut	188 ± 14	8.4	80 ± 21	3.6
Posterior Midgut	203 ± 41	9.1	64 ± 10	2.9
Hindgut	56 ± 14	2.5	48 ± 11	2.2
Tubule	38 ± 1.0	1.7	35 ± 3.5	1.6
Perirectal Tubules	45 ± 9.3	2.0
Rectal complex	36 ± 0.7	1.6	38 ± 5.3	1.7
Rectum	18 ± 0.9	0.8
Fat Body	90 ± 31	4.1	185 ± 84	8.3
Male Gonads	87 ± 28	3.9
Female Gonads	61 ± 13	2.7
Carcass	66 ± 7.0	3.0	57 ± 12	2.6

Whole Body	22 ± 0.1		22 ± 5.8

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005006-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005006	133 ± 14	90 ± 3.1	85 ± 12	72 ± 7.7

TC005006-RA	133 ± 14	90 ± 3.1	85 ± 12	72 ± 7.7