BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC005073
Symbol
 LOC656229
Product
 pumilio
NCBI Equivalent
656229
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head16 ± 2.21.48.2 ± 1.30.7
Brain20 ± 1.71.813 ± 1.01.1
Anterior Midgut2.6 ± 0.60.23.5 ± 0.50.3
Posterior Midgut2.9 ± 0.90.33.3 ± 0.60.3
Hindgut2.8 ± 0.80.36.9 ± 1.80.6
Tubules (Free)7.4 ± 0.80.710 ± 0.80.9
Perirectal Tubules18 ± 4.81.6  
Rectum11 ± 0.51.0  
Rectal complex5.3 ± 1.70.56.9 ± 1.60.6
Fat Body3.9 ± 0.70.41.5 ± 0.10.1
Male Gonads8.8 ± 1.20.8  
Female Gonads5.0 ± 1.00.4  
Carcass2.9 ± 0.90.34.5 ± 0.70.4
Whole Body11 ± 0.512 ± 8.7
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC005073-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0050731.8 ± 0.21.6 ± 0.61.9 ± 0.51.4 ± 0.4
TC005073-RA1.8 ± 0.21.6 ± 0.61.9 ± 0.51.4 ± 0.4
0–1 h1–24 h24–36 h36–72 h0246810FPKM