BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005086

Symbol
tsu

Product
tsunagi

NCBI Equivalent
656135

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	14 ± 0.3	0.8	34 ± 5.1	1.6
Brain	36 ± 1.8	2.2	42 ± 10	1.9
Anterior Midgut	117 ± 15	7.1	84 ± 5.7	3.9
Posterior Midgut	130 ± 21	7.9	76 ± 6.1	3.5
Hindgut	47 ± 7.2	2.9	37 ± 13	1.7
Tubules (Free)	17 ± 2.5	1.0	16 ± 0.1	0.7
Perirectal Tubules	17 ± 2.4	1.0
Rectum	16 ± 2.3	1.0
Rectal complex	19 ± 0.1	1.1	20 ± 1.1	0.9
Fat Body	31 ± 3.0	1.9	52 ± 11	2.4
Male Gonads	44 ± 8.3	2.7
Female Gonads	51 ± 8.3	3.1
Carcass	37 ± 11	2.3	31 ± 4.0	1.4

Whole Body	16 ± 1.7		22 ± 2.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005086-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005086	136 ± 20	379 ± 70	551 ± 155	244 ± 63

TC005086-RA	136 ± 20	379 ± 70	551 ± 155	244 ± 63