BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005163

Symbol
LOC661616

Product
Small G protein signaling modulator 3 homolog-like Protein

NCBI Equivalent
661616

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.9 ± 0.2	1.8	9.0 ± 0.9	1.2
Brain	9.9 ± 0.9	2.3	7.4 ± 0.2	1.0
Anterior Midgut	5.5 ± 1.1	1.3	5.7 ± 0.7	0.8
Posterior Midgut	4.6 ± 0.7	1.1	6.7 ± 0.2	0.9
Hindgut	3.5 ± 0.3	0.8	4.4 ± 0.6	0.6
Tubules (Free)	5.7 ± 0.2	1.3	6.2 ± 0.4	0.9
Perirectal Tubules	6.7 ± 1.0	1.5
Rectum	5.6 ± 0.4	1.3
Rectal complex	5.8 ± 0.1	1.3	5.5 ± 0.7	0.8
Fat Body	3.4 ± 0.4	0.8	4.0 ± 1.4	0.5
Male Gonads	3.4 ± 1.5	0.8
Female Gonads	6.5 ± 0.1	1.5
Carcass	4.0 ± 0.1	0.9	5.6 ± 0.3	0.8

Whole Body	4.3 ± 0.2		7.3 ± 1.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005163-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005163	1.4 ± 0.3	0.7 ± 0.1	0.6 ± 0.1	0.8 ± 0.4

TC005163-RA	1.4 ± 0.3	0.7 ± 0.1	0.6 ± 0.1	0.8 ± 0.4