BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005175

Symbol
UbcE2H

Product
Ubiquitin-conjugating enzyme E2 N-like Protein

NCBI Equivalent
656730

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	26 ± 2.1	3.0	31 ± 4.1	1.3
Brain	114 ± 12	13	55 ± 5.2	2.4
Anterior Midgut	19 ± 1.6	2.2	38 ± 3.5	1.6
Posterior Midgut	38 ± 12	4.5	64 ± 32	2.8
Hindgut	77 ± 33	9.1	86 ± 35	3.7
Tubules (Free)	21 ± 2.1	2.5	27 ± 5.1	1.2
Perirectal Tubules	29 ± 2.1	3.5
Rectum	36 ± 2.9	4.3
Rectal complex	26 ± 1.6	3.0	27 ± 0.4	1.2
Fat Body	21 ± 10	2.4	104 ± 61	4.6
Male Gonads	21 ± 8.2	2.4
Female Gonads	60 ± 14	7.0
Carcass	57 ± 11	6.7	116 ± 72	5.1

Whole Body	8.5 ± 0.4		23 ± 4.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005175-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005175	18 ± 0.2	23 ± 2.3	20 ± 1.9	22 ± 4.9

TC005175-RA	18 ± 0.2	23 ± 2.3	20 ± 1.9	22 ± 4.9