BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC005229
Symbol
 Rab39
Product
 Ras-related protein Rab-26-like Protein
NCBI Equivalent
657760
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head12 ± 0.61.77.1 ± 0.81.0
Brain26 ± 0.93.614 ± 1.32.1
Anterior Midgut4.2 ± 0.70.67.6 ± 0.21.1
Posterior Midgut4.8 ± 0.40.79.5 ± 1.91.3
Hindgut22 ± 6.13.112 ± 4.11.7
Tubules (Free)14 ± 1.52.012 ± 0.61.7
Perirectal Tubules18 ± 6.42.5  
Rectum8.5 ± 0.61.2  
Rectal complex16 ± 1.12.212 ± 0.41.8
Fat Body9.8 ± 0.51.423 ± 4.23.3
Male Gonads11 ± 2.81.6  
Female Gonads11 ± 1.81.6  
Carcass19 ± 3.82.714 ± 3.22.0
Whole Body7.2 ± 1.77.0 ± 0.6
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC005229-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00522920 ± 1.012 ± 1.09.1 ± 0.77.9 ± 1.9
TC005229-RA20 ± 1.012 ± 1.09.1 ± 0.77.9 ± 1.9
0–1 h1–24 h24–36 h36–72 h051015202530FPKM