BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005232

Symbol
Men-b

Product
NADP-dependent malic enzyme-like Protein

NCBI Equivalent
657607

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	76 ± 4.3	2.2	85 ± 16	2.3
Brain	241 ± 17	7.0	136 ± 12	3.7
Anterior Midgut	93 ± 8.1	2.7	103 ± 16	2.8
Posterior Midgut	89 ± 12	2.6	61 ± 13	1.6
Hindgut	78 ± 32	2.3	45 ± 13	1.2
Tubules (Free)	62 ± 1.8	1.8	31 ± 5.0	0.8
Perirectal Tubules	29 ± 0.9	0.9
Rectum	41 ± 0.3	1.2
Rectal complex	30 ± 1.8	0.9	22 ± 1.1	0.6
Fat Body	23 ± 1.3	0.7	7.2 ± 4.1	0.2
Male Gonads	31 ± 6.7	0.9
Female Gonads	39 ± 10.0	1.1
Carcass	267 ± 77	7.8	406 ± 121	11

Whole Body	34 ± 1.8		37 ± 6.1

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005232-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005232	6.6 ± 0.7	2.7 ± 0.2	2.1 ± 0.2	4.4 ± 0.2

TC005232-RA	6.6 ± 0.7	2.7 ± 0.2	2.1 ± 0.2	4.4 ± 0.2