BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC005339
Symbol
 Ptpmeg
Product
 Tyrosine-protein phosphatase non-receptor type 4-like Protein
NCBI Equivalent
663190
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head8.8 ± 0.41.24.7 ± 0.70.7
Brain13 ± 1.01.99.1 ± 0.71.4
Anterior Midgut7.3 ± 1.11.08.8 ± 0.81.3
Posterior Midgut6.5 ± 1.60.97.4 ± 0.61.1
Hindgut3.6 ± 0.50.53.7 ± 0.20.6
Tubules (Free)5.8 ± 0.40.87.3 ± 0.51.1
Perirectal Tubules6.0 ± 0.40.8  
Rectum8.6 ± 0.21.2  
Rectal complex4.1 ± 0.70.64.1 ± 0.50.6
Fat Body4.9 ± 0.40.73.4 ± 0.20.5
Male Gonads3.5 ± 0.50.5  
Female Gonads8.6 ± 1.71.2  
Carcass4.1 ± 0.20.64.1 ± 1.70.6
Whole Body7.1 ± 0.56.6 ± 3.4
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC005339-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0053394.1 ± 0.22.2 ± 0.21.8 ± 0.42.3 ± 0.6
TC005339-RA4.1 ± 0.22.2 ± 0.21.8 ± 0.42.3 ± 0.6
0–1 h1–24 h24–36 h36–72 h0246810FPKM