BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC005347
Symbol
 LOC662807
Product
 Spermatogenesis-associated protein 20-like Protein
NCBI Equivalent
662807
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head35 ± 2.41.120 ± 6.51.2
Brain114 ± 5.43.652 ± 5.63.0
Anterior Midgut13 ± 0.80.416 ± 0.81.0
Posterior Midgut13 ± 1.20.419 ± 0.81.1
Hindgut41 ± 151.334 ± 4.02.0
Tubules (Free)27 ± 1.10.822 ± 1.31.3
Perirectal Tubules53 ± 111.7  
Rectum28 ± 1.20.9  
Rectal complex40 ± 3.51.334 ± 2.52.0
Fat Body45 ± 161.431 ± 171.8
Male Gonads93 ± 182.9  
Female Gonads11 ± 1.70.4  
Carcass70 ± 5.52.241 ± 132.4
Whole Body32 ± 4.017 ± 2.5
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC005347-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0053474.5 ± 0.32.0 ± 0.12.0 ± 0.22.7 ± 0.6
TC005347-RA4.5 ± 0.32.0 ± 0.12.0 ± 0.22.7 ± 0.6
0–1 h1–24 h24–36 h36–72 h0246810FPKM