BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005404

Symbol
LOC659194

Product
Thioredoxin domain-containing protein 9-like Protein

NCBI Equivalent
659194

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	13 ± 1.1	0.6	38 ± 7.7	2.1
Brain	21 ± 1.1	0.9	28 ± 2.3	1.5
Anterior Midgut	28 ± 1.9	1.2	17 ± 2.1	0.9
Posterior Midgut	30 ± 3.9	1.3	20 ± 1.9	1.1
Hindgut	27 ± 1.3	1.2	33 ± 6.2	1.8
Tubules (Free)	18 ± 0.6	0.8	17 ± 1.0	0.9
Perirectal Tubules	9.8 ± 0.5	0.4
Rectum	13 ± 1.0	0.5
Rectal complex	16 ± 0.8	0.7	20 ± 1.8	1.1
Fat Body	45 ± 9.1	1.9	27 ± 6.3	1.5
Male Gonads	91 ± 6.4	3.9
Female Gonads	23 ± 2.0	1.0
Carcass	30 ± 4.6	1.3	34 ± 9.2	1.8

Whole Body	23 ± 2.0		18 ± 3.1

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005404-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005404	27 ± 0.3	31 ± 3.0	45 ± 4.0	43 ± 11

TC005404-RA	27 ± 0.3	31 ± 3.0	45 ± 4.0	43 ± 11