BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC005405
Symbol
 Rrp40
Product
 Exosome complex component RRP40-like Protein
NCBI Equivalent
659032
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head8.2 ± 1.20.723 ± 2.61.6
Brain14 ± 1.31.213 ± 2.20.9
Anterior Midgut40 ± 2.23.324 ± 3.51.7
Posterior Midgut44 ± 8.23.622 ± 1.01.5
Hindgut19 ± 3.51.615 ± 9.11.1
Tubules (Free)11 ± 1.61.012 ± 1.40.9
Perirectal Tubules16 ± 1.41.3  
Rectum17 ± 0.91.4  
Rectal complex14 ± 1.41.112 ± 0.40.8
Fat Body18 ± 3.31.515 ± 3.81.0
Male Gonads16 ± 2.51.4  
Female Gonads24 ± 2.62.0  
Carcass12 ± 1.11.014 ± 1.41.0
Whole Body12 ± 1.214 ± 10
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC005405-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00540555 ± 3.251 ± 5.068 ± 6.437 ± 6.2
TC005405-RA55 ± 3.251 ± 5.068 ± 6.437 ± 6.2
0–1 h1–24 h24–36 h36–72 h01020304050607080FPKM