BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005408

Symbol
Clic

Product
Chloride intracellular channel exc-4-like Protein

NCBI Equivalent
658685

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	52 ± 2.5	1.1	98 ± 18	1.5
Brain	114 ± 0.1	2.4	146 ± 6.1	2.2
Anterior Midgut	831 ± 66	17	989 ± 106	15
Posterior Midgut	952 ± 32	20	663 ± 87	9.9
Hindgut	606 ± 359	13	503 ± 436	7.5
Tubules (Free)	85 ± 4.8	1.8	99 ± 4.6	1.5
Perirectal Tubules	210 ± 5.0	4.4
Rectum	199 ± 12	4.2
Rectal complex	161 ± 7.0	3.4	154 ± 9.9	2.3
Fat Body	91 ± 12	1.9	90 ± 20	1.3
Male Gonads	195 ± 51	4.1
Female Gonads	325 ± 46	6.8
Carcass	324 ± 79	6.8	165 ± 48	2.5

Whole Body	48 ± 2.9		67 ± 8.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005408-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005408	160 ± 18	123 ± 26	114 ± 25	104 ± 23

TC005408-RA	160 ± 18	123 ± 26	114 ± 25	104 ± 23