BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005428

Symbol
AstC

Product
allatostatin-C

NCBI Equivalent
100216359

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	58 ± 1.8	5.0	14 ± 8.5	1.1
Brain	2112 ± 84	182	1914 ± 217	144
Anterior Midgut	3.1 ± 2.8	0.3	5.8 ± 1.0	0.4
Posterior Midgut	555 ± 57	48	428 ± 79	32
Hindgut	107 ± 178	9.2	0.6 ± 0.5	0.0
Tubules (Free)	0.0 ± 0.1	0.0	0.0 ± 0.0	0.0
Perirectal Tubules	0.1 ± 0.1	0.0
Rectum	0.7 ± 0.5	0.1
Rectal complex	0.9 ± 0.3	0.1	0.3 ± 0.3	0.0
Fat Body	22 ± 7.2	1.9	15 ± 24	1.2
Male Gonads	23 ± 2.5	2.0
Female Gonads	1.0 ± 0.4	0.1
Carcass	7.4 ± 9.7	0.6	14 ± 7.0	1.1

Whole Body	12 ± 2.2		13 ± 6.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005428-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005428	1.8 ± 0.1	7.4 ± 1.8	13 ± 1.3	29 ± 3.3

TC005428-RA	1.8 ± 0.1	7.4 ± 1.8	13 ± 1.3	29 ± 3.3