BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC005512
Symbol
 ema
Product
 Protein CLEC16A-like Protein
NCBI Equivalent
663055
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head12 ± 0.50.613 ± 2.11.0
Brain14 ± 0.70.79.5 ± 0.70.7
Anterior Midgut9.0 ± 0.70.59.6 ± 0.90.7
Posterior Midgut10 ± 1.30.515 ± 1.31.1
Hindgut9.5 ± 1.60.513 ± 0.30.9
Tubules (Free)17 ± 0.20.920 ± 0.61.4
Perirectal Tubules18 ± 2.50.9  
Rectum19 ± 1.51.0  
Rectal complex17 ± 1.40.916 ± 1.51.1
Fat Body26 ± 5.81.37.4 ± 3.20.5
Male Gonads33 ± 7.31.7  
Female Gonads7.9 ± 0.80.4  
Carcass11 ± 0.90.511 ± 5.50.8
Whole Body20 ± 2.614 ± 0.5
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC005512-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0055122.6 ± 0.11.6 ± 0.11.3 ± 0.11.2 ± 0.6
TC005512-RA2.6 ± 0.11.6 ± 0.11.3 ± 0.11.2 ± 0.6
0–1 h1–24 h24–36 h36–72 h0246810FPKM