BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC005539

Symbol
PolD2

Product
DNA polymerase delta small subunit-like Protein

iBeetle-Base
TC005539

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	1.0 ± 0.2	0.3	2.6 ± 0.7	1.3
Brain	1.0 ± 0.1	0.3	1.4 ± 0.1	0.7
Anterior Midgut	4.2 ± 0.3	1.1	3.0 ± 0.2	1.5
Posterior Midgut	3.8 ± 0.2	1.0	3.0 ± 0.7	1.5
Hindgut	0.8 ± 0.2	0.2	0.8 ± 0.2	0.4
Tubule	1.6 ± 0.3	0.4	1.5 ± 0.3	0.7
Rectal complex	1.1 ± 0.2	0.3	1.9 ± 0.2	0.9
Fat Body	1.7 ± 0.3	0.5	1.1 ± 0.8	0.5
Male Gonads	3.2 ± 0.2	0.9
Female Gonads	5.1 ± 1.1	1.4
Carcass	0.4 ± 0.1	0.1	1.3 ± 0.2	0.6

WholeBody	3.7 ± 0.6		2.0 ± 0.3

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult											Larval
	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005539-RA
TC005539-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005539	4.8 ± 0.6	7.6 ± 0.2	8.4 ± 1.5	2.5 ± 0.4

TC005539-RA	0.1 ± 0.0	0.3 ± 0.2	0.2 ± 0.2	0.0 ± 0.1
TC005539-RB	4.7 ± 0.6	7.4 ± 0.3	8.2 ± 1.6	2.5 ± 0.4