BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC005572
Symbol
 LOC656961
Product
 TGF-beta activated kinase 1
NCBI Equivalent
656961
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head6.8 ± 0.20.414 ± 1.71.5
Brain8.2 ± 0.40.58.3 ± 0.30.9
Anterior Midgut13 ± 0.60.813 ± 1.71.4
Posterior Midgut12 ± 1.30.813 ± 0.51.4
Hindgut6.0 ± 1.00.46.6 ± 1.50.7
Tubules (Free)5.4 ± 0.30.36.0 ± 0.20.6
Perirectal Tubules9.7 ± 0.30.6  
Rectum10 ± 0.20.7  
Rectal complex8.1 ± 0.10.58.3 ± 0.80.9
Fat Body15 ± 3.61.06.7 ± 1.30.7
Male Gonads26 ± 5.31.6  
Female Gonads12 ± 0.80.7  
Carcass6.3 ± 0.70.47.9 ± 1.10.8
Whole Body16 ± 2.19.4 ± 1.7
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC005572-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0055729.5 ± 0.85.5 ± 0.85.4 ± 0.27.6 ± 0.7
TC005572-RA9.5 ± 0.85.5 ± 0.85.4 ± 0.27.6 ± 0.7
0–1 h1–24 h24–36 h36–72 h05101520FPKM