BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005664

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	1.9 ± 0.2	0.2	13 ± 4.4	0.7
Brain	0.1 ± 0.1	0.0	0.7 ± 0.2	0.0
Anterior Midgut	91 ± 9.0	11	230 ± 4.2	12
Posterior Midgut	128 ± 2.9	16	158 ± 24	8.2
Hindgut	7.2 ± 1.6	0.9	13 ± 1.5	0.7
Tubules (Free)	13 ± 1.0	1.7	13 ± 0.8	0.7
Perirectal Tubules	15 ± 1.3	1.9
Rectum	14 ± 0.6	1.8
Rectal complex	12 ± 1.1	1.6	11 ± 1.5	0.5
Fat Body	2.1 ± 0.6	0.3	0.5 ± 0.2	0.0
Male Gonads	3.2 ± 1.4	0.4
Female Gonads	6.8 ± 0.6	0.9
Carcass	4.3 ± 2.4	0.5	4.2 ± 0.6	0.2

Whole Body	7.9 ± 0.2		19 ± 6.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005664-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005664	12 ± 0.9	13 ± 1.3	6.3 ± 0.9	10 ± 1.2

TC005664-RA	12 ± 0.9	13 ± 1.3	6.3 ± 0.9	10 ± 1.2