BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005676

Symbol
MsrA

Product
Peptide methionine sulfoxide reductase-like Protein

NCBI Equivalent
655619

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	53 ± 3.2	1.0	233 ± 76	0.6
Brain	19 ± 4.1	0.4	108 ± 22	0.3
Anterior Midgut	0.8 ± 0.2	0.0	0.7 ± 0.3	0.0
Posterior Midgut	12 ± 4.0	0.2	17 ± 5.8	0.0
Hindgut	22 ± 15	0.4	24 ± 9.7	0.1
Tubules (Free)	2968 ± 357	56	1661 ± 325	4.3
Perirectal Tubules	5.9 ± 1.8	0.1
Rectum	8.8 ± 3.2	0.2
Rectal complex	9.6 ± 0.6	0.2	104 ± 47	0.3
Fat Body	5.7 ± 2.9	0.1	903 ± 282	2.3
Male Gonads	3.6 ± 2.0	0.1
Female Gonads	3.1 ± 0.8	0.1
Carcass	422 ± 340	8.0	803 ± 366	2.1

Whole Body	53 ± 8.9		386 ± 492

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005676-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005676	8.1 ± 0.9	5.6 ± 0.4	3.5 ± 0.6	30 ± 4.9

TC005676-RA	8.1 ± 0.9	5.6 ± 0.4	3.5 ± 0.6	30 ± 4.9