BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC005686
NCBI Equivalent
 not available
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head11 ± 0.80.40.1 ± 0.10.0
Brain0.8 ± 0.20.00.0 ± 0.00.0
Anterior Midgut136 ± 324.730 ± 7.81.3
Posterior Midgut51 ± 9.51.827 ± 3.61.2
Hindgut3.2 ± 1.70.10.1 ± 0.10.0
Tubules (Free)0.1 ± 0.10.00.0 ± 0.00.0
Perirectal Tubules0.5 ± 0.20.0  
Rectum0.2 ± 0.10.0  
Rectal complex0.4 ± 0.20.00.1 ± 0.10.0
Fat Body9.4 ± 4.50.361 ± 252.7
Male Gonads2.0 ± 0.90.1  
Female Gonads0.6 ± 0.20.0  
Carcass98 ± 693.47.9 ± 7.40.4
Whole Body29 ± 10.023 ± 14
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC005686-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0056865.4 ± 0.62.0 ± 0.60.2 ± 0.10.6 ± 0.1
TC005686-RA5.4 ± 0.62.0 ± 0.60.2 ± 0.10.6 ± 0.1
0–1 h1–24 h24–36 h36–72 h0246810FPKM