BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005702

Symbol
Pgant3

Product
Polypeptide N-acetylgalactosaminyltransferase 3-like Protein

NCBI Equivalent
664097

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.0 ± 0.3	1.5	13 ± 3.1	2.0
Brain	0.2 ± 0.0	n.a.	0.6 ± 0.1	0.1
Anterior Midgut	0.1 ± 0.1	n.a.	0.1 ± 0.1	0.0
Posterior Midgut	0.0 ± 0.0	n.a.	0.1 ± 0.1	0.0
Hindgut	0.9 ± 0.4	n.a.	1.7 ± 0.3	0.3
Tubules (Free)	0.0 ± 0.0	n.a.	0.0 ± 0.1	0.0
Perirectal Tubules	0.8 ± 0.9	n.a.
Rectum	2.6 ± 0.2	1.3
Rectal complex	1.3 ± 0.1	n.a.	3.1 ± 0.6	0.5
Fat Body	1.1 ± 0.3	n.a.	4.8 ± 0.5	0.7
Male Gonads	0.4 ± 0.1	n.a.
Female Gonads	10 ± 1.9	5.1
Carcass	3.5 ± 1.9	1.7	5.9 ± 1.8	0.9

Whole Body	1.9 ± 1.0		6.5 ± 0.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005702-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005702	6.1 ± 1.0	1.8 ± 0.2	0.4 ± 0.1	1.3 ± 0.1

TC005702-RA	6.1 ± 1.0	1.8 ± 0.2	0.4 ± 0.1	1.3 ± 0.1