For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs
or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)
Gene:
ANATOMICAL KEY
Symbol
Sod2
Sod2
Product
Superoxide dismutase [Mn], mitochondrial-like Protein
Superoxide dismutase [Mn], mitochondrial-like Protein
Beetle Paralogues
none identified
none identified
SDs Whole Body
Adult & Larval Gene FPKMs and Enrichments
| Adult | Larval | |||
|---|---|---|---|---|
| Tissue | FPKM | Enrichment | FPKM | Enrichment |
| Head | 71 ± 4.3 | 1.3 | 134 ± 8.6 | 1.1 |
| Brain | 84 ± 2.1 | 1.6 | 116 ± 13 | 1.0 |
| Anterior Midgut | 381 ± 34 | 7.1 | 189 ± 22 | 1.6 |
| Posterior Midgut | 357 ± 38 | 6.6 | 142 ± 7.4 | 1.2 |
| Hindgut | 209 ± 37 | 3.9 | 256 ± 46 | 2.1 |
| Tubules (Free) | 78 ± 9.5 | 1.4 | 93 ± 14 | 0.8 |
| Perirectal Tubules | 560 ± 175 | 10 | ||
| Rectum | 116 ± 2.0 | 2.2 | ||
| Rectal complex | 226 ± 8.1 | 4.2 | 319 ± 54 | 2.7 |
| Fat Body | 286 ± 74 | 5.3 | 845 ± 144 | 7.1 |
| Male Gonads | 61 ± 6.2 | 1.1 | ||
| Female Gonads | 125 ± 4.2 | 2.3 | ||
| Carcass | 472 ± 7.5 | 8.8 | 685 ± 103 | 5.7 |
| Whole Body | 54 ± 2.7 | 119 ± 82 | ||
Rotate to see Transcript Table
Adult & Larval Transcript FPKMs
| Transcript | Adult | Larval | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Hd | Br | Ag | Pg | Hg | Tu | Pt | Rm | Rc | Fb | Gm | Gf | Cs | Hd | Br | Ag | Pg | Hg | Tu | Rc | Fb | Cs | |
| TC005780-RA | ||||||||||||||||||||||
Embryo FPKMs
| StageEmbryo | 0–1 h | 1–24 h | 24–36 h | 36–72 h |
|---|---|---|---|---|
| TC005780 | 273 ± 33 | 123 ± 17 | 166 ± 35 | 165 ± 26 |
| TC005780-RA | 273 ± 33 | 123 ± 17 | 166 ± 35 | 165 ± 26 |