BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC005815

Symbol
step

Product
Cytohesin-3-like Protein

iBeetle-Base
TC005815

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	24 ± 1.6	0.4	38 ± 2.9	0.9
Brain	28 ± 0.7	0.5	24 ± 1.6	0.6
Anterior Midgut	12 ± 0.7	0.2	15 ± 3.8	0.3
Posterior Midgut	13 ± 0.9	0.2	19 ± 2.3	0.4
Hindgut	28 ± 3.2	0.5	54 ± 6.3	1.2
Tubule	16 ± 3.0	0.3	26 ± 3.3	0.6
Perirectal Tubules	21 ± 2.6	0.3
Rectal complex	25 ± 2.2	0.4	21 ± 0.7	0.5
Rectum	25 ± 2.0	0.4
Fat Body	151 ± 58	2.5	342 ± 260	8.0
Male Gonads	258 ± 42	4.3
Female Gonads	30 ± 1.2	0.5
Carcass	40 ± 8.6	0.7	29 ± 2.7	0.7

Whole Body	60 ± 12		43 ± 6.0

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005815-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005815	23 ± 1.1	14 ± 1.5	15 ± 0.5	16 ± 0.9

TC005815-RA	23 ± 1.1	14 ± 1.5	15 ± 0.5	16 ± 0.9