BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005832

Symbol
Hel89B

Product
TATA-binding protein-associated factor 172-like Protein

NCBI Equivalent
655073

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	6.5 ± 1.4	1.3	8.0 ± 1.1	1.1
Brain	2.1 ± 0.3	0.4	1.6 ± 0.1	0.2
Anterior Midgut	2.2 ± 0.2	0.5	1.1 ± 0.1	0.2
Posterior Midgut	2.0 ± 0.2	0.4	1.6 ± 0.1	0.2
Hindgut	0.8 ± 0.0	0.2	1.7 ± 0.7	0.2
Tubules (Free)	9.4 ± 0.3	1.9	13 ± 0.2	1.8
Perirectal Tubules	8.0 ± 1.1	1.6
Rectum	6.8 ± 0.6	1.4
Rectal complex	6.1 ± 0.9	1.2	6.8 ± 1.8	1.0
Fat Body	1.0 ± 0.2	0.2	1.3 ± 0.6	0.2
Male Gonads	0.6 ± 0.3	0.1
Female Gonads	0.3 ± 0.1	0.1
Carcass	1.3 ± 0.2	0.3	1.6 ± 0.5	0.2

Whole Body	5.0 ± 0.5		7.1 ± 1.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005832-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005832	0.3 ± 0.0	1.1 ± 0.1	1.4 ± 0.2	1.1 ± 0.3

TC005832-RA	0.3 ± 0.0	1.1 ± 0.1	1.4 ± 0.2	1.1 ± 0.3