BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC005834

Symbol
LOC661855

Product
E3 SUMO-protein ligase NSE2-like Protein

iBeetle-Base
TC005834

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	4.5 ± 0.5	0.8	6.3 ± 1.4	1.5
Brain	2.9 ± 0.2	0.5	2.9 ± 0.7	0.7
Anterior Midgut	4.0 ± 1.6	0.7	4.0 ± 0.7	0.9
Posterior Midgut	5.0 ± 0.8	0.9	4.8 ± 0.7	1.1
Hindgut	5.6 ± 3.1	1.0	5.3 ± 0.3	1.2
Tubule	9.3 ± 1.0	1.6	8.7 ± 0.9	2.0
Perirectal Tubules	6.3 ± 1.1	1.1
Rectal complex	5.5 ± 0.8	1.0	6.0 ± 1.0	1.4
Rectum	6.8 ± 1.2	1.2
Fat Body	4.9 ± 0.6	0.9	7.7 ± 2.9	1.8
Male Gonads	6.8 ± 1.0	1.2
Female Gonads	12 ± 1.5	2.0
Carcass	3.9 ± 0.6	0.7	5.1 ± 0.8	1.2

Whole Body	5.7 ± 0.9		4.3 ± 1.1

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005834-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005834	95 ± 8.8	38 ± 4.3	33 ± 1.1	22 ± 1.6

TC005834-RA	95 ± 8.8	38 ± 4.3	33 ± 1.1	22 ± 1.6