BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005852

Symbol
LOC660375

Product
Dual oxidase maturation factor 1-like Protein

NCBI Equivalent
660375

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.4 ± 0.5	0.6	10 ± 2.8	1.0
Brain	0.1 ± 0.0	0.0	0.2 ± 0.0	0.0
Anterior Midgut	35 ± 4.6	3.6	30 ± 1.1	3.1
Posterior Midgut	45 ± 12	4.7	33 ± 9.4	3.4
Hindgut	1.0 ± 0.3	0.1	1.6 ± 0.6	0.2
Tubules (Free)	4.3 ± 0.6	0.4	6.0 ± 0.5	0.6
Perirectal Tubules	0.9 ± 0.1	0.1
Rectum	1.9 ± 0.3	0.2
Rectal complex	2.3 ± 0.5	0.2	3.4 ± 0.9	0.3
Fat Body	6.2 ± 1.6	0.6	4.4 ± 0.8	0.4
Male Gonads	4.4 ± 2.6	0.5
Female Gonads	0.7 ± 0.1	0.1
Carcass	1.7 ± 0.8	0.2	0.8 ± 0.5	0.1

Whole Body	9.6 ± 2.2		9.9 ± 2.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005852-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005852	2.1 ± 0.1	2.0 ± 0.1	1.9 ± 0.1	2.0 ± 0.1

TC005852-RA	2.1 ± 0.1	2.0 ± 0.1	1.9 ± 0.1	2.0 ± 0.1