BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005858

Symbol
LOC659870

Product
Sphingomyelin phosphodiesterase-like Protein

NCBI Equivalent
659870

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	24 ± 2.5	1.8	40 ± 2.3	1.5
Brain	9.8 ± 0.4	0.8	8.9 ± 2.0	0.3
Anterior Midgut	2.0 ± 0.2	0.2	3.1 ± 1.0	0.1
Posterior Midgut	1.5 ± 0.0	0.1	3.4 ± 1.0	0.1
Hindgut	3.1 ± 0.4	0.2	6.0 ± 0.1	0.2
Tubules (Free)	5.5 ± 0.7	0.4	7.0 ± 0.4	0.3
Perirectal Tubules	33 ± 12	2.6
Rectum	4.0 ± 0.1	0.3
Rectal complex	19 ± 3.0	1.4	32 ± 2.0	1.2
Fat Body	22 ± 8.8	1.7	43 ± 43	1.7
Male Gonads	17 ± 3.9	1.3
Female Gonads	4.9 ± 4.7	0.4
Carcass	23 ± 2.4	1.8	56 ± 7.1	2.1

Whole Body	13 ± 0.8		26 ± 12

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005858-RA
TC005858-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005858	0.4 ± 0.1	3.0 ± 0.6	5.4 ± 0.9	12 ± 0.6

TC005858-RA	0.3 ± 0.1	2.7 ± 0.5	4.8 ± 1.1	11 ± 0.8
TC005858-RB	0.1 ± 0.1	0.2 ± 0.1	0.6 ± 0.3	1.0 ± 0.2