BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC005879

Symbol
LOC657353

Product
Galactokinase-like Protein

NCBI Equivalent
657353

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	9.3 ± 0.6	0.3	1.8 ± 0.4	0.1
Brain	2.4 ± 0.0	0.1	2.3 ± 0.3	0.1
Anterior Midgut	113 ± 18	4.0	77 ± 12	4.1
Posterior Midgut	79 ± 3.7	2.8	48 ± 12	2.6
Hindgut	5.4 ± 2.3	0.2	6.3 ± 0.4	0.3
Tubules (Free)	15 ± 0.3	0.5	25 ± 3.0	1.3
Perirectal Tubules	3.1 ± 0.7	0.1
Rectum	3.5 ± 0.2	0.1
Rectal complex	1.9 ± 0.4	0.1	4.3 ± 0.5	0.2
Fat Body	32 ± 4.6	1.1	89 ± 36	4.8
Male Gonads	35 ± 1.3	1.2
Female Gonads	3.0 ± 0.2	0.1
Carcass	17 ± 8.8	0.6	6.8 ± 4.5	0.4

Whole Body	28 ± 4.2		19 ± 5.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC005879-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC005879	9.1 ± 0.4	20 ± 0.9	29 ± 2.8	20 ± 1.9

TC005879-RA	9.1 ± 0.4	20 ± 0.9	29 ± 2.8	20 ± 1.9