BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC006104
Symbol
 HDAC3
Product
 Histone deacetylase Rpd3-like Protein
NCBI Equivalent
657899
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head11 ± 0.80.718 ± 0.71.5
Brain15 ± 0.61.013 ± 0.41.1
Anterior Midgut10 ± 1.10.68.4 ± 1.70.7
Posterior Midgut10 ± 0.80.79.1 ± 1.00.8
Hindgut8.2 ± 0.50.510 ± 1.70.9
Tubules (Free)7.2 ± 1.20.59.3 ± 1.00.8
Perirectal Tubules14 ± 1.50.9  
Rectum15 ± 1.41.0  
Rectal complex12 ± 1.00.813 ± 1.01.2
Fat Body11 ± 2.00.78.7 ± 0.60.8
Male Gonads20 ± 2.11.3  
Female Gonads23 ± 2.21.5  
Carcass6.6 ± 0.80.47.8 ± 2.20.7
Whole Body15 ± 1.612 ± 4.5
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC006104-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00610420 ± 1.428 ± 4.827 ± 2.617 ± 3.5
TC006104-RA20 ± 1.428 ± 4.827 ± 2.617 ± 3.5
0–1 h1–24 h24–36 h36–72 h0510152025303540FPKM