BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC006187

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	18 ± 5.4	4.8	60 ± 19	2.3
Brain	0.7 ± 0.0	0.2	2.6 ± 0.1	0.1
Anterior Midgut	0.5 ± 0.2	0.1	2.0 ± 0.4	0.1
Posterior Midgut	0.5 ± 0.2	0.1	2.1 ± 0.4	0.1
Hindgut	28 ± 9.1	7.2	52 ± 15	2.0
Tubules (Free)	1.5 ± 0.1	0.4	1.1 ± 0.1	0.0
Perirectal Tubules	14 ± 13	3.8
Rectum	47 ± 2.2	12
Rectal complex	27 ± 1.0	7.2	31 ± 1.4	1.2
Fat Body	2.1 ± 0.7	0.6	3.4 ± 2.7	0.1
Male Gonads	1.2 ± 0.1	0.3
Female Gonads	1.0 ± 0.6	0.3
Carcass	86 ± 2.4	22	69 ± 57	2.7

Whole Body	3.8 ± 0.4		26 ± 20

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006187-RA
TC006187-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006187	1.3 ± 0.1	0.9 ± 0.1	1.9 ± 0.1	2.6 ± 0.1

TC006187-RA	0.0 ± 0.0	0.1 ± 0.2	0.0 ± 0.0	0.5 ± 0.5
TC006187-RB	1.3 ± 0.1	0.8 ± 0.3	1.9 ± 0.1	2.1 ± 0.5