BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC006303

Symbol
LOC661563

Product
Lysosomal Pro-X carboxypeptidase-like Protein

NCBI Equivalent
661563

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	1.2 ± 0.4	0.1	0.4 ± 0.5	0.0
Brain	0.0 ± 0.0	0.0	0.2 ± 0.1	0.0
Anterior Midgut	23 ± 1.3	2.4	85 ± 29	4.3
Posterior Midgut	83 ± 12	8.7	193 ± 76	9.7
Hindgut	305 ± 100	32	342 ± 300	17
Tubules (Free)	0.0 ± 0.0	0.0	0.0 ± 0.0	0.0
Perirectal Tubules	1.5 ± 1.7	0.2
Rectum	5.9 ± 1.4	0.6
Rectal complex	4.3 ± 1.0	0.4	4.6 ± 1.8	0.2
Fat Body	8.5 ± 6.3	0.9	0.2 ± 0.2	0.0
Male Gonads	0.3 ± 0.1	0.0
Female Gonads	0.8 ± 0.9	0.1
Carcass	0.7 ± 0.1	0.1	0.3 ± 0.3	0.0

Whole Body	9.6 ± 1.7		20 ± 10

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006303-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006303	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.1

TC006303-RA	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.1