BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC006307

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.2 ± 0.2	0.7	7.0 ± 1.3	1.4
Brain	1.7 ± 0.2	0.4	1.9 ± 0.1	0.4
Anterior Midgut	5.0 ± 0.2	1.1	3.5 ± 0.2	0.7
Posterior Midgut	5.1 ± 0.3	1.1	4.5 ± 0.9	0.9
Hindgut	2.1 ± 0.9	0.5	2.9 ± 0.8	0.6
Tubules (Free)	3.4 ± 0.3	0.8	3.1 ± 0.3	0.6
Perirectal Tubules	4.4 ± 0.1	1.0
Rectum	4.4 ± 0.3	1.0
Rectal complex	6.2 ± 0.5	1.4	6.6 ± 0.5	1.3
Fat Body	3.9 ± 1.1	0.9	6.4 ± 3.3	1.2
Male Gonads	3.7 ± 0.2	0.8
Female Gonads	2.2 ± 0.1	0.5
Carcass	2.6 ± 0.3	0.6	3.4 ± 1.2	0.7

Whole Body	4.4 ± 0.7		5.2 ± 0.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006307-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006307	3.0 ± 0.2	3.4 ± 0.1	3.0 ± 0.2	2.2 ± 0.2

TC006307-RA	3.0 ± 0.2	3.4 ± 0.1	3.0 ± 0.2	2.2 ± 0.2