BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC006319

Symbol
LOC103313936

NCBI Equivalent
103313936

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.5 ± 0.9	1.0	20 ± 3.9	1.8
Brain	14 ± 0.3	2.6	18 ± 1.4	1.6
Anterior Midgut	9.7 ± 1.0	1.8	11 ± 2.3	1.0
Posterior Midgut	10 ± 0.7	1.9	12 ± 1.8	1.1
Hindgut	23 ± 0.9	4.3	22 ± 0.7	2.0
Tubules (Free)	37 ± 1.2	6.9	33 ± 2.1	3.0
Perirectal Tubules	8.4 ± 4.5	1.6
Rectum	15 ± 3.2	2.8
Rectal complex	17 ± 0.7	3.1	11 ± 0.5	1.0
Fat Body	12 ± 0.9	2.2	11 ± 1.7	1.0
Male Gonads	5.8 ± 0.2	1.1
Female Gonads	46 ± 5.2	8.5
Carcass	7.3 ± 0.9	1.3	16 ± 0.9	1.5

Whole Body	5.4 ± 1.7		11 ± 4.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006319-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006319	42 ± 0.8	25 ± 0.7	34 ± 3.4	38 ± 5.6

TC006319-RA	42 ± 0.8	25 ± 0.7	34 ± 3.4	38 ± 5.6